What kind of fans are you using? They may not be powerful enough? Have you thought about after market coolers?
http://www.newegg.com/Store/SubCateg...me=VGA-Cooling
Aside from that, there is water cooling, but it seems like you don't want to go that route. Not that I blame you, that can get pretty expensive pretty fast. lol
You could always buy a new case too. I'm not sure how much of a difference that would make for most cases though. But say you bought something like the Antec Twelve Hundred, I'm pretty sure that would make a difference, but its pricey.
What about modding? Have you thought about adding more fans wherever you can? You could add fan(s) onto the side panel positioned over the graphics cards, or you could add a fan to the top of the case which would be smart since heat rises, so that would provide an outlet for that.